STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABARAPL2Gamma-aminobutyric acid receptor-associated protein-like 2 isoform X1. (117 aa)    
Predicted Functional Partners:
NBR1
Next to BRCA1 gene 1 protein isoform X1.
   
 0.999
ATG7
Ubiquitin-like modifier-activating enzyme ATG7 isoform X1.
   
 0.996
ATG4B
Cysteine protease ATG4B.
   
 0.994
ATG4A
Cysteine protease ATG4A isoform X1.
   
 0.991
ATG4C
Cysteine protease ATG4C isoform X1.
   
 0.988
SQSTM1
Sequestosome-1 isoform X1.
   
 0.988
ATG5
Autophagy-related protein 5.
   
 0.984
ATG16L1
Autophagy-related protein 16-1 isoform X1.
    
 0.980
FUNDC1
FUN14 domain-containing protein 1.
    
 0.970
TBC1D15
TBC1 domain family member 15.
   
 0.969
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.