STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRATLOW QUALITY PROTEIN: carnitine O-acetyltransferase. (665 aa)    
Predicted Functional Partners:
SCP2
Non-specific lipid-transfer protein isoform X1.
   
 0.808
HTD2
Hydroxyacyl-thioester dehydratase type 2, mitochondrial-like.
   
 0.783
HSDL2
Hydroxysteroid dehydrogenase-like protein 2.
   
 0.728
SLC25A20
Solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29.
   
 
 0.708
ECI2
Enoyl-CoA delta isomerase 2, mitochondrial isoform X1.
   
 0.681
ACSL5
Long-chain-fatty-acid--CoA ligase 5.
   
  
 0.642
PEX14
Peroxisomal membrane protein PEX14.
    
 0.636
PEX5
Peroxisomal biogenesis factor 5 isoform X1.
    
 0.629
PEX5L
PEX5-related protein isoform X1.
    
 0.629
ACOX1
Peroxisomal acyl-coenzyme A oxidase 1 isoform X1.
   
 0.628
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.