Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GDNF | GFRA1 | ENSNMEP00000005803 | ENSNMEP00000014405 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha-1. | 0.948 |
GDNF | GFRA2 | ENSNMEP00000005803 | ENSNMEP00000022898 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha 2. | 0.936 |
GDNF | GFRA3 | ENSNMEP00000005803 | ENSNMEP00000000547 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha-3. | 0.830 |
GDNF | GFRA4 | ENSNMEP00000005803 | ENSNMEP00000005138 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha-4. | 0.681 |
GDNF | GFRAL | ENSNMEP00000005803 | ENSNMEP00000024997 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha-like isoform X1. | 0.786 |
GDNF | NRTN | ENSNMEP00000005803 | ENSNMEP00000008276 | Glial cell derived neurotrophic factor. | Neurturin isoform X1. | 0.637 |
GDNF | NTF3 | ENSNMEP00000005803 | ENSNMEP00000017804 | Glial cell derived neurotrophic factor. | Neurotrophin-3 isoform X1. | 0.723 |
GDNF | NTRK3 | ENSNMEP00000005803 | ENSNMEP00000027567 | Glial cell derived neurotrophic factor. | Neurotrophic tyrosine kinase, receptor type 3. | 0.757 |
GDNF | RET | ENSNMEP00000005803 | ENSNMEP00000015620 | Glial cell derived neurotrophic factor. | Proto-oncogene tyrosine-protein kinase receptor Ret isoform X1. | 0.939 |
GFRA1 | GDNF | ENSNMEP00000014405 | ENSNMEP00000005803 | GDNF family receptor alpha-1. | Glial cell derived neurotrophic factor. | 0.948 |
GFRA1 | NRTN | ENSNMEP00000014405 | ENSNMEP00000008276 | GDNF family receptor alpha-1. | Neurturin isoform X1. | 0.796 |
GFRA1 | RET | ENSNMEP00000014405 | ENSNMEP00000015620 | GDNF family receptor alpha-1. | Proto-oncogene tyrosine-protein kinase receptor Ret isoform X1. | 0.978 |
GFRA2 | GDNF | ENSNMEP00000022898 | ENSNMEP00000005803 | GDNF family receptor alpha 2. | Glial cell derived neurotrophic factor. | 0.936 |
GFRA2 | NRTN | ENSNMEP00000022898 | ENSNMEP00000008276 | GDNF family receptor alpha 2. | Neurturin isoform X1. | 0.999 |
GFRA2 | NTF3 | ENSNMEP00000022898 | ENSNMEP00000017804 | GDNF family receptor alpha 2. | Neurotrophin-3 isoform X1. | 0.593 |
GFRA2 | NTRK3 | ENSNMEP00000022898 | ENSNMEP00000027567 | GDNF family receptor alpha 2. | Neurotrophic tyrosine kinase, receptor type 3. | 0.612 |
GFRA2 | RET | ENSNMEP00000022898 | ENSNMEP00000015620 | GDNF family receptor alpha 2. | Proto-oncogene tyrosine-protein kinase receptor Ret isoform X1. | 0.991 |
GFRA3 | GDNF | ENSNMEP00000000547 | ENSNMEP00000005803 | GDNF family receptor alpha-3. | Glial cell derived neurotrophic factor. | 0.830 |
GFRA3 | NRTN | ENSNMEP00000000547 | ENSNMEP00000008276 | GDNF family receptor alpha-3. | Neurturin isoform X1. | 0.739 |
GFRA3 | RET | ENSNMEP00000000547 | ENSNMEP00000015620 | GDNF family receptor alpha-3. | Proto-oncogene tyrosine-protein kinase receptor Ret isoform X1. | 0.935 |
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