STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D5TBC1 domain family member 5 isoform X1. (925 aa)    
Predicted Functional Partners:
VPS29
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 29.
    
 
 0.969
ENSNMEP00000025652
Vacuolar protein sorting-associated protein 29-like.
    
 
 0.887
VPS35
Vacuolar protein sorting-associated protein 35.
   
 
 0.864
VPS26A
Vacuolar protein sorting-associated protein 26A isoform X1.
   
 
 0.821
VPS26B
Vacuolar protein sorting-associated protein 26B.
   
 
 0.806
ANGPT4
Angiopoietin-4 isoform X1.
      
 0.603
TMEM9
Transmembrane protein 9 isoform X1.
      
 0.602
KIAA1217
Sickle tail protein homolog isoform X1.
      
 0.577
PEX3
Peroxisomal biogenesis factor 3 isoform X1.
      
 0.576
PDE1B
Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B.
      
 0.565
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.