Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BLZF1 | TMED3 | ENSNMEP00000020025 | ENSNMEP00000010365 | Golgin-45. | Transmembrane emp24 domain-containing protein 3. | 0.677 |
LOC110397608 | TMED10 | ENSNMEP00000001232 | ENSNMEP00000026568 | Transmembrane emp24 domain-containing protein 11-like. | Transmembrane emp24 domain-containing protein 10. | 0.990 |
LOC110397608 | TMED2 | ENSNMEP00000001232 | ENSNMEP00000016683 | Transmembrane emp24 domain-containing protein 11-like. | Transmembrane emp24 domain-containing protein 2. | 0.985 |
LOC110397608 | TMED3 | ENSNMEP00000001232 | ENSNMEP00000010365 | Transmembrane emp24 domain-containing protein 11-like. | Transmembrane emp24 domain-containing protein 3. | 0.858 |
MAP3K7 | TLR3 | ENSNMEP00000009300 | ENSNMEP00000008637 | Mitogen-activated protein kinase kinase kinase 7. | Toll-like receptor 3. | 0.937 |
MAP3K7 | TLR4 | ENSNMEP00000009300 | ENSNMEP00000006404 | Mitogen-activated protein kinase kinase kinase 7. | Toll-like receptor 4. | 0.949 |
MAP3K7 | TMED3 | ENSNMEP00000009300 | ENSNMEP00000010365 | Mitogen-activated protein kinase kinase kinase 7. | Transmembrane emp24 domain-containing protein 3. | 0.728 |
MAP3K7 | TRAF6 | ENSNMEP00000009300 | ENSNMEP00000009665 | Mitogen-activated protein kinase kinase kinase 7. | TNF receptor-associated factor 6. | 0.996 |
MRPL46 | MRPS35 | ENSNMEP00000027566 | ENSNMEP00000002754 | Mitochondrial ribosomal protein L46. | 28S ribosomal protein S35, mitochondrial. | 0.976 |
MRPL46 | TMED3 | ENSNMEP00000027566 | ENSNMEP00000010365 | Mitochondrial ribosomal protein L46. | Transmembrane emp24 domain-containing protein 3. | 0.689 |
MRPS35 | MRPL46 | ENSNMEP00000002754 | ENSNMEP00000027566 | 28S ribosomal protein S35, mitochondrial. | Mitochondrial ribosomal protein L46. | 0.976 |
MRPS35 | TMED3 | ENSNMEP00000002754 | ENSNMEP00000010365 | 28S ribosomal protein S35, mitochondrial. | Transmembrane emp24 domain-containing protein 3. | 0.677 |
TLR3 | MAP3K7 | ENSNMEP00000008637 | ENSNMEP00000009300 | Toll-like receptor 3. | Mitogen-activated protein kinase kinase kinase 7. | 0.937 |
TLR3 | TLR4 | ENSNMEP00000008637 | ENSNMEP00000006404 | Toll-like receptor 3. | Toll-like receptor 4. | 0.632 |
TLR3 | TMED3 | ENSNMEP00000008637 | ENSNMEP00000010365 | Toll-like receptor 3. | Transmembrane emp24 domain-containing protein 3. | 0.729 |
TLR3 | TRAF6 | ENSNMEP00000008637 | ENSNMEP00000009665 | Toll-like receptor 3. | TNF receptor-associated factor 6. | 0.986 |
TLR4 | MAP3K7 | ENSNMEP00000006404 | ENSNMEP00000009300 | Toll-like receptor 4. | Mitogen-activated protein kinase kinase kinase 7. | 0.949 |
TLR4 | TLR3 | ENSNMEP00000006404 | ENSNMEP00000008637 | Toll-like receptor 4. | Toll-like receptor 3. | 0.632 |
TLR4 | TMED3 | ENSNMEP00000006404 | ENSNMEP00000010365 | Toll-like receptor 4. | Transmembrane emp24 domain-containing protein 3. | 0.815 |
TLR4 | TRAF6 | ENSNMEP00000006404 | ENSNMEP00000009665 | Toll-like receptor 4. | TNF receptor-associated factor 6. | 0.994 |
page 1 of 2