Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANGPT1 | PDGFB | ENSNMEP00000004346 | ENSNMEP00000012792 | Angiopoietin 1. | Platelet-derived growth factor subunit B. | 0.620 |
ANGPT1 | TEK | ENSNMEP00000004346 | ENSNMEP00000010728 | Angiopoietin 1. | Endothelial-specific receptor tyrosine kinase. | 0.992 |
ANGPT1 | VEGFC | ENSNMEP00000004346 | ENSNMEP00000016942 | Angiopoietin 1. | Vascular endothelial growth factor C isoform X1. | 0.621 |
ANGPT2 | PDGFB | ENSNMEP00000025022 | ENSNMEP00000012792 | Angiopoietin-2 isoform X1. | Platelet-derived growth factor subunit B. | 0.620 |
ANGPT2 | TEK | ENSNMEP00000025022 | ENSNMEP00000010728 | Angiopoietin-2 isoform X1. | Endothelial-specific receptor tyrosine kinase. | 0.996 |
ANGPT2 | VEGFC | ENSNMEP00000025022 | ENSNMEP00000016942 | Angiopoietin-2 isoform X1. | Vascular endothelial growth factor C isoform X1. | 0.636 |
ANGPT4 | TEK | ENSNMEP00000018603 | ENSNMEP00000010728 | Angiopoietin-4 isoform X1. | Endothelial-specific receptor tyrosine kinase. | 0.992 |
CSF1 | TEK | ENSNMEP00000009501 | ENSNMEP00000010728 | Macrophage colony-stimulating factor 1. | Endothelial-specific receptor tyrosine kinase. | 0.795 |
GRB2 | KITLG | ENSNMEP00000012904 | ENSNMEP00000005845 | Growth factor receptor-binding protein 2. | KIT ligand. | 0.484 |
GRB2 | PDGFB | ENSNMEP00000012904 | ENSNMEP00000012792 | Growth factor receptor-binding protein 2. | Platelet-derived growth factor subunit B. | 0.440 |
GRB2 | TEK | ENSNMEP00000012904 | ENSNMEP00000010728 | Growth factor receptor-binding protein 2. | Endothelial-specific receptor tyrosine kinase. | 0.890 |
KITLG | GRB2 | ENSNMEP00000005845 | ENSNMEP00000012904 | KIT ligand. | Growth factor receptor-binding protein 2. | 0.484 |
KITLG | TEK | ENSNMEP00000005845 | ENSNMEP00000010728 | KIT ligand. | Endothelial-specific receptor tyrosine kinase. | 0.848 |
PDGFB | ANGPT1 | ENSNMEP00000012792 | ENSNMEP00000004346 | Platelet-derived growth factor subunit B. | Angiopoietin 1. | 0.620 |
PDGFB | ANGPT2 | ENSNMEP00000012792 | ENSNMEP00000025022 | Platelet-derived growth factor subunit B. | Angiopoietin-2 isoform X1. | 0.620 |
PDGFB | GRB2 | ENSNMEP00000012792 | ENSNMEP00000012904 | Platelet-derived growth factor subunit B. | Growth factor receptor-binding protein 2. | 0.440 |
PDGFB | PDGFC | ENSNMEP00000012792 | ENSNMEP00000024275 | Platelet-derived growth factor subunit B. | Platelet derived growth factor C/D. | 0.982 |
PDGFB | TEK | ENSNMEP00000012792 | ENSNMEP00000010728 | Platelet-derived growth factor subunit B. | Endothelial-specific receptor tyrosine kinase. | 0.830 |
PDGFB | VEGFA | ENSNMEP00000012792 | ENSNMEP00000019032 | Platelet-derived growth factor subunit B. | Vascular endothelial growth factor A isoform X1. | 0.908 |
PDGFB | VEGFC | ENSNMEP00000012792 | ENSNMEP00000016942 | Platelet-derived growth factor subunit B. | Vascular endothelial growth factor C isoform X1. | 0.926 |
page 1 of 3