STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WARS1Tryptophan--tRNA ligase, cytoplasmic. (473 aa)    
Predicted Functional Partners:
WARS2
Tryptophan--tRNA ligase, mitochondrial isoform X1.
     
 0.954
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
  
 
 0.902
YARS2
Tyrosine--tRNA ligase, mitochondrial.
  
  
 0.866
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
  
 
0.847
SARS1
Serine--tRNA ligase, cytoplasmic.
  
 
 0.801
TARS1
Threonine--tRNA ligase, cytoplasmic.
  
  
 0.777
SARS2
seryl-tRNA synthetase 2, mitochondrial.
  
 
 0.767
RARS1
Arginine--tRNA ligase, cytoplasmic.
  
  
 0.723
FARSB
Phenylalanine--tRNA ligase beta subunit isoform X1.
  
  
 0.719
AARS1
Alanine--tRNA ligase, cytoplasmic.
  
 
 0.712
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.