STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS20A disintegrin and metalloproteinase with thrombospondin motifs 20. (1897 aa)    
Predicted Functional Partners:
FBLN1
Fibulin-1 isoform X1.
    
 0.599
VPS33A
Vacuolar protein sorting-associated protein 33A.
      
 0.576
OSTM1
Osteopetrosis-associated transmembrane protein 1 (chloride channel 7 beta subunit).
      
 0.545
ACAN
Aggrecan core protein isoform X1.
     
 0.514
SPECC1L
Cytospin-A isoform X1.
   
  
 0.489
TSR3
TSR3 ribosome maturation factor.
      
 0.478
ATRN
Attractin.
      
 0.475
POFUT2
GDP-fucose protein O-fucosyltransferase 2 isoform X1.
     
 0.433
MSANTD1
Myb/SANT-like DNA-binding domain-containing protein 1 isoform X1.
      
 0.424
B3GLCT
UDP-glucose:O-linked fucose beta-1,3-glucosyltransferase.
    
 0.417
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.