Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASCL4 | BHLHA9 | ENSNMEP00000012961 | ENSNMEP00000019666 | Achaete-scute family bHLH transcription factor 4. | Class A basic helix-loop-helix protein 9. | 0.489 |
ASCL4 | BHLHE23 | ENSNMEP00000012961 | ENSNMEP00000018401 | Achaete-scute family bHLH transcription factor 4. | Class B basic helix-loop-helix protein 4/5. | 0.492 |
ASCL4 | ENSNMEP00000019977 | ENSNMEP00000012961 | ENSNMEP00000019977 | Achaete-scute family bHLH transcription factor 4. | annotation not available | 0.452 |
ASCL4 | LDB1 | ENSNMEP00000012961 | ENSNMEP00000015324 | Achaete-scute family bHLH transcription factor 4. | LIM domain-binding protein 1 isoform X1. | 0.404 |
ASCL4 | LDB2 | ENSNMEP00000012961 | ENSNMEP00000022422 | Achaete-scute family bHLH transcription factor 4. | LIM domain-binding protein 2 isoform X1. | 0.404 |
ASCL4 | LOC110391943 | ENSNMEP00000012961 | ENSNMEP00000001913 | Achaete-scute family bHLH transcription factor 4. | Uncharacterized protein LOC110391943 isoform X1. | 0.449 |
ASCL4 | MAIP1 | ENSNMEP00000012961 | ENSNMEP00000000829 | Achaete-scute family bHLH transcription factor 4. | M-AAA protease-interacting protein 1, mitochondrial. | 0.446 |
ASCL4 | TCF12 | ENSNMEP00000012961 | ENSNMEP00000026450 | Achaete-scute family bHLH transcription factor 4. | Transcription factor 12 isoform X1. | 0.449 |
ASCL4 | TCF3 | ENSNMEP00000012961 | ENSNMEP00000002230 | Achaete-scute family bHLH transcription factor 4. | Transcription factor 3. | 0.449 |
ASCL4 | TCF4 | ENSNMEP00000012961 | ENSNMEP00000017283 | Achaete-scute family bHLH transcription factor 4. | Transcription factor 4/12. | 0.449 |
BHLHA9 | ASCL4 | ENSNMEP00000019666 | ENSNMEP00000012961 | Class A basic helix-loop-helix protein 9. | Achaete-scute family bHLH transcription factor 4. | 0.489 |
BHLHA9 | BHLHE23 | ENSNMEP00000019666 | ENSNMEP00000018401 | Class A basic helix-loop-helix protein 9. | Class B basic helix-loop-helix protein 4/5. | 0.483 |
BHLHE23 | ASCL4 | ENSNMEP00000018401 | ENSNMEP00000012961 | Class B basic helix-loop-helix protein 4/5. | Achaete-scute family bHLH transcription factor 4. | 0.492 |
BHLHE23 | BHLHA9 | ENSNMEP00000018401 | ENSNMEP00000019666 | Class B basic helix-loop-helix protein 4/5. | Class A basic helix-loop-helix protein 9. | 0.483 |
ENSNMEP00000019977 | ASCL4 | ENSNMEP00000019977 | ENSNMEP00000012961 | annotation not available | Achaete-scute family bHLH transcription factor 4. | 0.452 |
ENSNMEP00000019977 | MAIP1 | ENSNMEP00000019977 | ENSNMEP00000000829 | annotation not available | M-AAA protease-interacting protein 1, mitochondrial. | 0.475 |
LDB1 | ASCL4 | ENSNMEP00000015324 | ENSNMEP00000012961 | LIM domain-binding protein 1 isoform X1. | Achaete-scute family bHLH transcription factor 4. | 0.404 |
LDB1 | LOC110391943 | ENSNMEP00000015324 | ENSNMEP00000001913 | LIM domain-binding protein 1 isoform X1. | Uncharacterized protein LOC110391943 isoform X1. | 0.579 |
LDB1 | TCF12 | ENSNMEP00000015324 | ENSNMEP00000026450 | LIM domain-binding protein 1 isoform X1. | Transcription factor 12 isoform X1. | 0.579 |
LDB1 | TCF3 | ENSNMEP00000015324 | ENSNMEP00000002230 | LIM domain-binding protein 1 isoform X1. | Transcription factor 3. | 0.579 |
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