Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLSPN | USP28 | ENSNMEP00000006197 | ENSNMEP00000013587 | Claspin isoform X1. | Ubiquitin specific peptidase 28. | 0.818 |
DHX58 | IFIH1 | ENSNMEP00000007156 | ENSNMEP00000027219 | Probable ATP-dependent RNA helicase DHX58 isoform X1. | Interferon-induced helicase C domain-containing protein 1. | 0.972 |
DHX58 | RPS27A | ENSNMEP00000007156 | ENSNMEP00000010956 | Probable ATP-dependent RNA helicase DHX58 isoform X1. | Ubiquitin-small subunit ribosomal protein S27Ae. | 0.680 |
DHX58 | UBA52 | ENSNMEP00000007156 | ENSNMEP00000003348 | Probable ATP-dependent RNA helicase DHX58 isoform X1. | Ubiquitin-60S ribosomal protein L40 isoform X1. | 0.618 |
DHX58 | UBC | ENSNMEP00000007156 | ENSNMEP00000016238 | Probable ATP-dependent RNA helicase DHX58 isoform X1. | Polyubiquitin-C isoform X1. | 0.630 |
DHX58 | USP28 | ENSNMEP00000007156 | ENSNMEP00000013587 | Probable ATP-dependent RNA helicase DHX58 isoform X1. | Ubiquitin specific peptidase 28. | 0.573 |
IFIH1 | DHX58 | ENSNMEP00000027219 | ENSNMEP00000007156 | Interferon-induced helicase C domain-containing protein 1. | Probable ATP-dependent RNA helicase DHX58 isoform X1. | 0.972 |
IFIH1 | RPS27A | ENSNMEP00000027219 | ENSNMEP00000010956 | Interferon-induced helicase C domain-containing protein 1. | Ubiquitin-small subunit ribosomal protein S27Ae. | 0.861 |
IFIH1 | UBA52 | ENSNMEP00000027219 | ENSNMEP00000003348 | Interferon-induced helicase C domain-containing protein 1. | Ubiquitin-60S ribosomal protein L40 isoform X1. | 0.794 |
IFIH1 | UBC | ENSNMEP00000027219 | ENSNMEP00000016238 | Interferon-induced helicase C domain-containing protein 1. | Polyubiquitin-C isoform X1. | 0.630 |
IFIH1 | USP28 | ENSNMEP00000027219 | ENSNMEP00000013587 | Interferon-induced helicase C domain-containing protein 1. | Ubiquitin specific peptidase 28. | 0.575 |
MYC | USP28 | ENSNMEP00000008843 | ENSNMEP00000013587 | Myc proto-oncogene protein. | Ubiquitin specific peptidase 28. | 0.602 |
RPS27A | DHX58 | ENSNMEP00000010956 | ENSNMEP00000007156 | Ubiquitin-small subunit ribosomal protein S27Ae. | Probable ATP-dependent RNA helicase DHX58 isoform X1. | 0.680 |
RPS27A | IFIH1 | ENSNMEP00000010956 | ENSNMEP00000027219 | Ubiquitin-small subunit ribosomal protein S27Ae. | Interferon-induced helicase C domain-containing protein 1. | 0.861 |
RPS27A | TRIP12 | ENSNMEP00000010956 | ENSNMEP00000012099 | Ubiquitin-small subunit ribosomal protein S27Ae. | E3 ubiquitin-protein ligase TRIP12 isoform X1. | 0.849 |
RPS27A | UBA52 | ENSNMEP00000010956 | ENSNMEP00000003348 | Ubiquitin-small subunit ribosomal protein S27Ae. | Ubiquitin-60S ribosomal protein L40 isoform X1. | 0.999 |
RPS27A | UBC | ENSNMEP00000010956 | ENSNMEP00000016238 | Ubiquitin-small subunit ribosomal protein S27Ae. | Polyubiquitin-C isoform X1. | 0.981 |
RPS27A | USP20 | ENSNMEP00000010956 | ENSNMEP00000007866 | Ubiquitin-small subunit ribosomal protein S27Ae. | Ubiquitin carboxyl-terminal hydrolase 20 isoform X1. | 0.426 |
RPS27A | USP28 | ENSNMEP00000010956 | ENSNMEP00000013587 | Ubiquitin-small subunit ribosomal protein S27Ae. | Ubiquitin specific peptidase 28. | 0.757 |
TRIP12 | RPS27A | ENSNMEP00000012099 | ENSNMEP00000010956 | E3 ubiquitin-protein ligase TRIP12 isoform X1. | Ubiquitin-small subunit ribosomal protein S27Ae. | 0.849 |
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