STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHLD1Shieldin complex subunit 1. (202 aa)    
Predicted Functional Partners:
SHLD2
Protein FAM35A isoform X1.
    
 
 0.999
MAD2L2
Mitotic spindle assembly checkpoint protein MAD2B.
    
 
 0.984
CTC1
CST complex subunit CTC1.
    
 
 0.667
RIF1
Telomere-associated protein RIF1 isoform X1.
    
 
 0.643
ERCC6L2
DNA excision repair protein ERCC-6-like 2 isoform X1.
      
 0.617
HMCES
Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein.
      
 0.583
LIG4
DNA ligase 4.
      
 0.577
LIG3
DNA ligase 3.
      
 0.576
FKBP1B
Peptidyl-prolyl cis-trans isomerase FKBP1B isoform X1.
      
 0.523
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2 isoform X1.
      
 0.493
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.