STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CROTPeroxisomal carnitine O-octanoyltransferase isoform X1. (620 aa)    
Predicted Functional Partners:
SCP2
Non-specific lipid-transfer protein isoform X1.
   
 
 0.802
HADHB
Trifunctional enzyme subunit beta, mitochondrial isoform X1.
   
  
 0.688
PEX10
Peroxisome biogenesis factor 10.
     
 0.676
LOC110401900
Acyl-coenzyme A thioesterase 1-like.
     
 0.637
LOC110401907
Acyl-coenzyme A thioesterase 5-like.
     
 0.637
PEX13
Peroxisome biogenesis factor 13.
     
 0.624
PEX12
Peroxisome assembly protein 12.
     
 0.623
RUNDC3B
RUN domain-containing protein 3B isoform X1.
      
 0.618
PEX5
Peroxisomal biogenesis factor 5 isoform X1.
     
 0.587
PEX5L
PEX5-related protein isoform X1.
     
 0.587
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.