STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MKRN2Probable E3 ubiquitin-protein ligase makorin-2 isoform X1. (417 aa)    
Predicted Functional Partners:
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
     
 0.746
TSEN2
TRNA-splicing endonuclease subunit Sen2 isoform X1.
      
 0.637
AGAP1
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11.
      
 0.635
SETD5
SET domain-containing protein 5 isoform X1.
      
 0.621
USP42
Ubiquitin specific peptidase 42.
      
 0.618
LOC110403930
Dual oxidase maturation factor 1-like.
      
 0.601
UBC
Polyubiquitin-C isoform X1.
   
  0.571
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
  0.558
CEP131
Centrosomal protein of 131 kDa isoform X1.
    
 
 0.512
ZNF598
E3 ubiquitin-protein ligase ZNF598.
      
 0.493
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.