STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTP4A1Protein tyrosine phosphatase 4A1. (173 aa)    
Predicted Functional Partners:
CSNK1A1
Casein kinase I isoform X1.
   
    0.773
RABGGTB
Geranylgeranyl transferase type-2 subunit beta.
    
 0.633
LSM14A
Protein LSM14 homolog A isoform X1.
   
    0.632
RCBTB1
RCC1 and BTB domain-containing protein 1.
      
 0.563
FAM13B
Protein FAM13B isoform X1.
      
 0.563
TMEM184C
Transmembrane protein 184C isoform X1.
      
 0.545
PHF11
PHD finger protein 11.
   
  
 0.482
PNISR
Splicing factor, arginine/serine-rich 18.
      
 0.482
MRPL20
39S ribosomal protein L20, mitochondrial.
      
 0.478
PHF3
PHD finger protein 3 isoform X1.
      
 0.475
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.