STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAX7Paired box protein Pax-7 isoform X1. (502 aa)    
Predicted Functional Partners:
MYOD1
Myoblast determination protein 1.
   
 
 0.970
MYF5
Myogenic factor 5.
   
 
 0.964
MYOG
Myogenic factor 4 (myogenin).
   
 
 0.963
MYF6
Myogenic factor 6 isoform X1.
   
 
 0.918
SHH
Sonic hedgehog signaling molecule.
      
 0.760
NKX2-2
Homeobox protein Nkx-2.2.
    
 
 0.727
BMP4
Bone morphogenetic protein 4 isoform X1.
      
 0.727
SOX10
Transcription factor SOX7/8/10/18 (SOX group E/F).
   
 
 0.714
ENSNMEP00000001998
annotation not available
    
 0.699
TIMM22
LOW QUALITY PROTEIN: mitochondrial import inner membrane translocase subunit Tim22.
    
 0.699
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.