STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB40BRas-related protein Rab-40B. (280 aa)    
Predicted Functional Partners:
RILPL1
RILP-like protein 1 isoform X1.
    
 0.683
WDR45B
WD repeat domain phosphoinositide-interacting protein 3 isoform X1.
   
  
 0.643
NOP16
Nucleolar protein 16.
      
 0.620
METRN
Meteorin.
      
 0.618
GDI2
Rab GDP dissociation inhibitor beta.
   
 0.595
ELOC
Elongin-C.
    
 
 0.583
METRNL
Meteorin-like protein.
      
 0.579
LOC110403045
Rab proteins geranylgeranyltransferase component A 1-like isoform X1.
    
 0.575
RABGGTB
Geranylgeranyl transferase type-2 subunit beta.
    
 0.574
VAMP7
Vesicle-associated membrane protein 7.
    
 
 0.547
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.