STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM55Tripartite motif-containing protein 55 isoform X1. (524 aa)    
Predicted Functional Partners:
MAP1LC3C
Microtubule associated protein 1 light chain 3 gamma.
   
 
 0.635
DCTD
Deoxycytidylate deaminase isoform X1.
      
 0.544
TMEM120A
Transmembrane protein 120A.
      
 0.544
MYL1
Myosin light chain 1/3, skeletal muscle isoform.
   
 
 0.502
NEXN
Nexilin isoform X1.
      
 0.478
FBXO25
F-box only protein 25.
      
 0.478
MAP1LC3A
Microtubule-associated proteins 1A/1B light chain 3A.
   
 
 0.455
UBC
Polyubiquitin-C isoform X1.
   
 0.435
ANO5
Anoctamin-5 isoform X1.
   
  
 0.430
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
  0.415
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.