STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC1SnRNA-activating protein complex subunit 1. (363 aa)    
Predicted Functional Partners:
SNAPC3
SnRNA-activating protein complex subunit 3-like.
    
 0.997
SNAPC4
SnRNA-activating protein complex subunit 4.
    
 0.996
SNAPC5
SnRNA-activating protein complex subunit 5.
    
 0.992
GTF2B
Transcription initiation factor IIB isoform X1.
    
 0.893
TBPL2
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.825
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.825
GTF2A1
Transcription initiation factor TFIIA large subunit.
    
  0.792
TBPL1
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.749
ENSNMEP00000001215
annotation not available
    
  0.747
GTF2A2
Transcription initiation factor TFIIA small subunit.
    
  0.747
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.