STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX16Sorting nexin-16. (347 aa)    
Predicted Functional Partners:
FCHSD1
F-BAR and double SH3 domains protein 1 isoform X1.
    
 
 0.622
SNX33
Sorting nexin-9/18/33.
      
 0.611
VPS26A
Vacuolar protein sorting-associated protein 26A isoform X1.
   
 
 0.596
ZBTB44
Zinc finger and BTB domain-containing protein 44 isoform X1.
      
 0.578
BRWD1
Bromodomain and WD repeat-containing protein 1 isoform X1.
      
 0.578
ZBTB41
Zinc finger and BTB domain-containing protein 41.
      
 0.578
SNX6
Sorting nexin-6 isoform X1.
      
 0.578
SNX18
Sorting nexin-9/18/33.
      
 0.575
PPP1R15B
Protein phosphatase 1 regulatory subunit 15B.
      
 0.485
HELZ
Probable helicase with zinc finger domain isoform X1.
      
 0.476
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.