STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPARCSecreted protein acidic and rich in cysteine. (304 aa)    
Predicted Functional Partners:
APOB
Apolipoprotein B-100.
   
 
  0.887
SPP1
Secreted phosphoprotein 1.
      
 0.875
LUM
Lumican.
   
  
 0.872
COL1A1
Collagen alpha-1(I) chain-like.
   
 
 0.796
DCN
Decorin.
   
  
 0.796
POSTN
Periostin isoform X1.
   
 
 0.639
VTN
Vitronectin.
   
  
 0.635
RUNX2
Runt-related transcription factor 2.
      
 0.634
FN1
Fibronectin isoform X1.
   
  
 0.628
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.604
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.