Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LINGO1 | OMG | ENSNMEP00000012617 | ENSNMEP00000013567 | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1. | Oligodendrocyte myelin glycoprotein. | 0.859 |
LINGO1 | RTN4R | ENSNMEP00000012617 | ENSNMEP00000027014 | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1. | Reticulon-4 receptor. | 0.643 |
LINGO1 | TNFRSF19 | ENSNMEP00000012617 | ENSNMEP00000022692 | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1. | Tumor necrosis factor receptor superfamily member 19. | 0.576 |
OMG | LINGO1 | ENSNMEP00000013567 | ENSNMEP00000012617 | Oligodendrocyte myelin glycoprotein. | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1. | 0.859 |
OMG | RTN4R | ENSNMEP00000013567 | ENSNMEP00000027014 | Oligodendrocyte myelin glycoprotein. | Reticulon-4 receptor. | 0.600 |
OMG | TNFRSF19 | ENSNMEP00000013567 | ENSNMEP00000022692 | Oligodendrocyte myelin glycoprotein. | Tumor necrosis factor receptor superfamily member 19. | 0.502 |
RTN4R | LINGO1 | ENSNMEP00000027014 | ENSNMEP00000012617 | Reticulon-4 receptor. | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1. | 0.643 |
RTN4R | OMG | ENSNMEP00000027014 | ENSNMEP00000013567 | Reticulon-4 receptor. | Oligodendrocyte myelin glycoprotein. | 0.600 |
RTN4R | TNFRSF19 | ENSNMEP00000027014 | ENSNMEP00000022692 | Reticulon-4 receptor. | Tumor necrosis factor receptor superfamily member 19. | 0.576 |
TNFRSF19 | LINGO1 | ENSNMEP00000022692 | ENSNMEP00000012617 | Tumor necrosis factor receptor superfamily member 19. | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1. | 0.576 |
TNFRSF19 | OMG | ENSNMEP00000022692 | ENSNMEP00000013567 | Tumor necrosis factor receptor superfamily member 19. | Oligodendrocyte myelin glycoprotein. | 0.502 |
TNFRSF19 | RTN4R | ENSNMEP00000022692 | ENSNMEP00000027014 | Tumor necrosis factor receptor superfamily member 19. | Reticulon-4 receptor. | 0.576 |