STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP1Matrix metalloproteinase-1 (interstitial collagenase). (467 aa)    
Predicted Functional Partners:
LOC110389860
Matrix metalloproteinase-3 (stromelysin 1, progelatinase).
  
 
0.904
TIMP2
Metalloproteinase inhibitor 2.
   
 0.815
TIMP3
Metalloproteinase inhibitor 3.
   
 0.761
COL1A1
Collagen alpha-1(I) chain-like.
   
 0.627
MMP7
Matrix metalloproteinase-7 (matrilysin, uterine).
  
0.602
MMP9
Matrix metalloproteinase-9 (gelatinase B).
   
0.592
LOC110396057
Plasminogen-like.
   
 0.580
ENSNMEP00000023683
annotation not available
   
 0.573
BSG
Basigin (Ok blood group).
    
 0.571
LOC110389866
Stromelysin-1-like.
  
 
0.562
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.