STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11orf54Ester hydrolase C11orf54 homolog. (321 aa)    
Predicted Functional Partners:
LOC110394258
Transmembrane 4 L6 family member 1-like.
      
 0.915
MED17
Mediator of RNA polymerase II transcription subunit 17 isoform X1.
 
    
 0.795
VSTM5
V-set and transmembrane domain-containing protein 5.
      
 0.767
HEPHL1
Hephaestin-like protein 1 isoform X1.
      
 0.760
SMCO4
Single-pass membrane and coiled-coil domain-containing protein 4.
      
 0.720
HEPH
Hephaestin isoform X1.
      
 0.635
GPR83
Probable G-protein coupled receptor 83.
      
 0.634
PANX1
Pannexin-1 isoform X1.
      
 0.551
TNNI1
Troponin I, slow skeletal muscle isoform X1.
      
 0.545
TMEM86A
Lysoplasmalogenase-like protein TMEM86A.
      
 0.485
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.