STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THBS1Thrombospondin 1. (1180 aa)    
Predicted Functional Partners:
CD47
CD47 antigen (Rh-related antigen, integrin-associated signal transducer).
   
 
 0.988
CD36
Platelet glycoprotein 4.
   
 0.984
ITGB3
Integrin beta-3 isoform X1.
   
 0.980
SDC1
Syndecan 1.
    
 0.960
ITGAV
Integrin alpha V.
   
 0.952
ITGB1
Integrin beta-1 isoform X1.
   
 0.947
SDC4
Syndecan 4.
     
 0.931
ITGA4
Integrin alpha-4 isoform X1.
   
 0.839
ITGB7
Integrin beta 7.
   
 0.817
ITGA9
Integrin alpha 9.
   
 0.808
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.