STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEUROD1Neurogenic differentiation factor 1. (357 aa)    
Predicted Functional Partners:
PAX6
Paired box protein Pax-6 isoform X1.
   
 
 0.797
ISL1
Insulin gene enhancer protein ISL-1.
   
  
 0.775
NKX2-2
Homeobox protein Nkx-2.2.
   
 0.670
MYT1L
Myelin transcription factor 1-like protein.
   
  
 0.667
RFX6
DNA-binding protein RFX6.
   
  
 0.667
SOX3
Transcription factor SOX1/3/14/21 (SOX group B).
   
 
 0.666
POU4F1
POU domain, class 4, transcription factor 1.
   
  
 0.643
LHX3
LIM homeobox 3.
   
  
 0.641
FOXN4
Forkhead box protein N4 isoform X1.
   
  
 0.638
VSX2
Visual system homeobox 2 isoform X1.
   
  
 0.632
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.