STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HECTD1E3 ubiquitin-protein ligase HECTD1 isoform X1. (2544 aa)    
Predicted Functional Partners:
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
  
0.777
UBA3
NEDD8-activating enzyme E1 catalytic subunit isoform X1.
     
 0.607
ZNF292
Zinc finger protein 292 isoform X1.
   
  
 0.602
UBR3
E3 ubiquitin-protein ligase UBR3 isoform X1.
   
  
 0.588
UBR4
E3 ubiquitin-protein ligase UBR4 isoform X1.
   
  
 0.496
UBR2
E3 ubiquitin-protein ligase UBR2 isoform X1.
   
  
 0.479
BIRC6
Baculoviral IAP repeat-containing protein 6 isoform X1.
   
 
 0.462
APC2
Adenomatous polyposis coli protein 2 isoform X1.
  
 
 0.429
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.