STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC6Tetratricopeptide repeat domain 6. (1277 aa)    
Predicted Functional Partners:
HCFC2
Host cell factor 2 isoform X1.
   
 0.906
MCRS1
Microspherule protein 1.
     
 0.729
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.692
BAP1
BRCA1 associated protein 1.
    
 0.644
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X1.
    
 0.644
TEX30
Testis-expressed protein 30 isoform X1.
    
 0.633
KANSL3
KAT8 regulatory NSL complex subunit 3 isoform X1.
    
 0.633
DNAAF4
Dynein axonemal assembly factor 4.
  
 
 0.547
SLC4A8
Solute carrier family 4 (sodium bicarbonate cotransporter), member 8.
   
    0.512
CLBA1
Uncharacterized protein C14orf79 homolog isoform X1.
   
    0.512
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.