STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSX2Visual system homeobox 2 isoform X1. (637 aa)    
Predicted Functional Partners:
ATOH7
Protein atonal homolog 7.
   
  
 0.784
POU4F1
POU domain, class 4, transcription factor 1.
   
  
 0.784
SIX3
Homeobox protein SIX3/6.
   
  
 0.771
ISL1
Insulin gene enhancer protein ISL-1.
      
 0.760
POU4F2
POU domain, class 4, transcription factor 2.
   
  
 0.672
BHLHE22
Class B basic helix-loop-helix protein 4/5.
   
  
 0.647
LOC110403447
Brain-specific homeobox/POU domain protein 3.
   
  
 0.646
RHO
Rhodopsin.
   
  
 0.643
LOC110388211
Green-sensitive opsin.
   
  
 0.642
CALB1
Calbindin.
      
 0.640
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.