STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM19Multiple RNA-binding domain-containing protein 1. (1045 aa)    
Predicted Functional Partners:
BMS1
Ribosome biogenesis protein BMS1 homolog isoform X1.
   
 
 0.989
IMP4
U3 small nucleolar ribonucleoprotein protein IMP4 isoform X1.
   
   0.963
PWP2
Periodic tryptophan protein 2 homolog isoform X1.
   
 
 0.928
AATF
Apoptosis antagonizing transcription factor.
   
 
 0.910
WDR12
Ribosome biogenesis protein WDR12.
   
  
 0.895
BYSL
Essential nuclear protein 1.
   
 
 0.883
PES1
Pescadillo homolog.
   
  
 0.880
BOP1
Ribosome biogenesis protein BOP1.
   
  
 0.871
DDX10
Probable ATP-dependent RNA helicase DDX10.
   
 
 0.871
DDX52
Probable ATP-dependent RNA helicase DDX52 isoform X1.
   
 
 0.869
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.