STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_007998Uncharacterized protein. (292 aa)    
Predicted Functional Partners:
ASZ78_003023
Uncharacterized protein.
 
     0.919
ASZ78_001765
Uncharacterized protein.
   
 0.910
ASZ78_011460
Uncharacterized protein.
   
 0.900
ASZ78_015149
Smg4_UPF3 domain-containing protein.
   
 0.866
ASZ78_016917
EST1 domain-containing protein.
 
     0.842
ASZ78_002292
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.822
ASZ78_007106
Uncharacterized protein.
   
 0.819
ASZ78_012276
DUF2439 domain-containing protein.
   
 0.780
ASZ78_012277
Uncharacterized protein.
   
 0.780
ASZ78_015975
mRNA_decap_C domain-containing protein.
    
 0.724
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.