STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_003158Uncharacterized protein. (348 aa)    
Predicted Functional Partners:
ASZ78_004139
Uncharacterized protein.
    
0.976
ASZ78_004137
MCU domain-containing protein.
    
 0.975
ASZ78_000592
Uncharacterized protein.
    
 0.954
ASZ78_012260
MCU domain-containing protein.
    
 0.876
ASZ78_000759
PHB domain-containing protein.
    
 0.771
ASZ78_005162
Uncharacterized protein.
    
0.733
ASZ78_008908
Prohibitin.
    
 0.653
ASZ78_011029
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
 
    
 0.619
ASZ78_008352
AAA domain-containing protein.
    
 0.604
ASZ78_003005
AAA domain-containing protein.
    
 0.598
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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