STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_012292HMG box domain-containing protein. (429 aa)    
Predicted Functional Partners:
ASZ78_001024
DNA polymerase.
   
 
 0.990
ASZ78_003817
DNA helicase; Belongs to the MCM family.
   
 
 0.988
ASZ78_010859
MCM domain-containing protein; Belongs to the MCM family.
   
 
 0.986
ASZ78_009673
MCM domain-containing protein; Belongs to the MCM family.
   
 
 0.984
ASZ78_012790
DNA helicase; Belongs to the MCM family.
   
 
 0.984
ASZ78_002788
DNA helicase; Belongs to the MCM family.
   
 
 0.982
ASZ78_015364
Uncharacterized protein.
   
 
 0.976
ASZ78_001667
Uncharacterized protein.
   
 
 0.974
ASZ78_003460
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
   
 
 0.965
ASZ78_009092
Sld5 domain-containing protein.
   
 
 0.962
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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