STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_005819ANK_REP_REGION domain-containing protein. (464 aa)    
Predicted Functional Partners:
ASZ78_002050
IFT81_CH domain-containing protein.
    
 0.627
ASZ78_007560
WHEP-TRS domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.618
ASZ78_016280
Uncharacterized protein.
    
 0.599
ASZ78_011020
Uncharacterized protein.
   
 0.597
ASZ78_005439
Uncharacterized protein.
    
 0.593
ASZ78_016602
Uncharacterized protein.
    
 0.580
ASZ78_004524
Uncharacterized protein.
    
 0.577
ASZ78_002232
Uncharacterized protein.
    
  0.575
ASZ78_011985
Uncharacterized protein.
   
 0.572
ASZ78_005418
Ribosomal_S3_C domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 0.569
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.