STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_011057Transcription factor BTF3; Belongs to the NAC-beta family. (138 aa)    
Predicted Functional Partners:
ASZ78_007968
Uncharacterized protein.
   
 
 0.964
ASZ78_004511
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.955
ASZ78_005974
NAC-A/B domain-containing protein.
   
 
 0.949
ASZ78_012736
NAC-A/B domain-containing protein.
   
 
 0.949
ASZ78_016196
NAC-A/B domain-containing protein.
   
 
 0.944
ASZ78_015328
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.939
ASZ78_011289
Uncharacterized protein.
   
   0.934
ASZ78_014323
Uncharacterized protein.
   
   0.933
ASZ78_011540
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.925
ASZ78_008961
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
   0.921
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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