STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_006787Uncharacterized protein. (515 aa)    
Predicted Functional Partners:
ASZ78_011985
Uncharacterized protein.
   
 0.737
ASZ78_003781
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.728
ASZ78_005599
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.722
ASZ78_013747
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.698
ASZ78_003209
CRAL_TRIO_N domain-containing protein.
      
 0.693
ASZ78_003818
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.681
ASZ78_005934
Small ubiquitin-related modifier.
   
 0.674
ASZ78_006507
MH1 domain-containing protein.
   
 0.649
ASZ78_008673
MH2 domain-containing protein.
   
 0.649
ASZ78_015386
Mothers against decapentaplegic homolog.
   
 0.649
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.