STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_002375EF-hand domain-containing protein. (3654 aa)    
Predicted Functional Partners:
ASZ78_011947
Uncharacterized protein.
  
 0.935
ASZ78_006909
Uncharacterized protein.
    
 0.864
ASZ78_015603
Uncharacterized protein.
  
0.831
ASZ78_009906
Uncharacterized protein.
  
 0.827
ASZ78_002019
Uncharacterized protein.
   
0.822
ASZ78_008863
Uncharacterized protein.
  
0.822
ASZ78_004954
Uncharacterized protein.
  
0.820
ASZ78_012725
Uncharacterized protein.
    
 0.799
ASZ78_014399
Dynein light chain.
    
 0.795
ASZ78_008256
Uncharacterized protein.
   
 0.789
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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