STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_007612Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (495 aa)    
Predicted Functional Partners:
ASZ78_013863
Uncharacterized protein.
 
 0.987
ASZ78_015238
Uncharacterized protein.
  
 0.933
ASZ78_001611
Aminotran_5 domain-containing protein.
  
 
 0.874
ASZ78_015995
Uncharacterized protein.
  
 
 0.870
ASZ78_002193
SHMT domain-containing protein.
  
 
 0.864
ASZ78_000150
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.856
ASZ78_003162
Phosphoserine aminotransferase.
  
 
 0.851
ASZ78_009934
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
    
 0.848
ASZ78_016244
Uncharacterized protein.
   
 0.847
ASZ78_007019
Uncharacterized protein.
    
 0.840
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.