Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASZ78_002809 | ASZ78_004035 | A0A226NK28 | A0A226MEB5 | RNA helicase. | Uncharacterized protein. | 0.933 |
ASZ78_002809 | ASZ78_004301 | A0A226NK28 | A0A226MJD2 | RNA helicase. | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | 0.737 |
ASZ78_002809 | ASZ78_007732 | A0A226NK28 | A0A226MFN1 | RNA helicase. | WD_REPEATS_REGION domain-containing protein. | 0.999 |
ASZ78_002809 | ASZ78_008576 | A0A226NK28 | A0A226NEB8 | RNA helicase. | BRCT domain-containing protein. | 0.998 |
ASZ78_002809 | ASZ78_009982 | A0A226NK28 | A0A226NAV9 | RNA helicase. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.997 |
ASZ78_002809 | ASZ78_013446 | A0A226NK28 | A0A226N9T0 | RNA helicase. | PseudoU_synth_1 domain-containing protein. | 0.765 |
ASZ78_002809 | FTSJ3 | A0A226NK28 | A0A226MKQ3 | RNA helicase. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.997 |
ASZ78_002809 | WDR4 | A0A226NK28 | A0A226MU02 | RNA helicase. | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. | 0.780 |
ASZ78_004035 | ASZ78_002809 | A0A226MEB5 | A0A226NK28 | Uncharacterized protein. | RNA helicase. | 0.933 |
ASZ78_004035 | ASZ78_004301 | A0A226MEB5 | A0A226MJD2 | Uncharacterized protein. | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | 0.526 |
ASZ78_004035 | ASZ78_007732 | A0A226MEB5 | A0A226MFN1 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.952 |
ASZ78_004035 | ASZ78_008576 | A0A226MEB5 | A0A226NEB8 | Uncharacterized protein. | BRCT domain-containing protein. | 0.995 |
ASZ78_004035 | ASZ78_009982 | A0A226MEB5 | A0A226NAV9 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.991 |
ASZ78_004035 | ASZ78_011258 | A0A226MEB5 | A0A226N5V8 | Uncharacterized protein. | Uncharacterized protein. | 0.443 |
ASZ78_004035 | FTSJ3 | A0A226MEB5 | A0A226MKQ3 | Uncharacterized protein. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.919 |
ASZ78_004035 | WDR4 | A0A226MEB5 | A0A226MU02 | Uncharacterized protein. | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. | 0.762 |
ASZ78_004301 | ASZ78_002809 | A0A226MJD2 | A0A226NK28 | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | RNA helicase. | 0.737 |
ASZ78_004301 | ASZ78_004035 | A0A226MJD2 | A0A226MEB5 | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | Uncharacterized protein. | 0.526 |
ASZ78_004301 | ASZ78_007732 | A0A226MJD2 | A0A226MFN1 | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | WD_REPEATS_REGION domain-containing protein. | 0.872 |
ASZ78_004301 | ASZ78_008576 | A0A226MJD2 | A0A226NEB8 | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | BRCT domain-containing protein. | 0.760 |
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