STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_011472Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (262 aa)    
Predicted Functional Partners:
ASZ78_013747
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.916
ASZ78_006020
FERM domain-containing protein.
      
 0.720
ASZ78_011547
Ribosomal_L14e domain-containing protein.
   
 
 0.686
ASZ78_010284
Ribosomal_L2_C domain-containing protein.
   
 
 0.656
ASZ78_000572
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
   0.643
ASZ78_015328
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.633
ASZ78_014470
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.629
ASZ78_008351
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
   0.627
ASZ78_012844
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.625
ASZ78_005418
Ribosomal_S3_C domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
   0.618
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.