STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_008458PHD-type domain-containing protein. (628 aa)    
Predicted Functional Partners:
ASZ78_011065
Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family.
    
 0.990
ASZ78_008092
HMG box domain-containing protein.
    
 0.989
ASZ78_007247
Uncharacterized protein.
   
 0.986
ASZ78_000083
Uncharacterized protein.
   
 0.885
ASZ78_014629
HMG box domain-containing protein.
    
 0.833
ASZ78_003979
GATA-type domain-containing protein.
    
 0.826
ASZ78_008542
WD_REPEATS_REGION domain-containing protein.
   
 0.824
ASZ78_011889
WD_REPEATS_REGION domain-containing protein.
   
 0.824
ASZ78_000161
Uncharacterized protein.
   
 0.820
ASZ78_014839
Uncharacterized protein.
   
 0.820
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.