STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_008047FCP1 homology domain-containing protein. (418 aa)    
Predicted Functional Partners:
ASZ78_003323
Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
    
 0.818
ASZ78_004125
SHS2_Rpb7-N domain-containing protein.
    
 0.799
ASZ78_015883
Uncharacterized protein.
   
 0.788
ASZ78_015575
LNS2 domain-containing protein.
    
 0.774
ASZ78_016798
LNS2 domain-containing protein.
    
 0.774
ASZ78_004293
TFIIF_beta domain-containing protein.
    
 0.773
ASZ78_007544
RPOL4c domain-containing protein.
    
 0.773
ASZ78_011829
Uncharacterized protein.
    
 0.768
ASZ78_016267
RNA_pol_L_2 domain-containing protein.
    
 0.749
ASZ78_009081
RPOLD domain-containing protein.
    
 0.734
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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