STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_004842Uncharacterized protein. (399 aa)    
Predicted Functional Partners:
ASZ78_010530
Chordin; Belongs to the chordin family.
    
 0.800
ASZ78_004841
TGF_BETA_2 domain-containing protein.
 
   
  0.794
ASZ78_005935
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.688
ASZ78_012950
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.606
ASZ78_005875
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.606
ASZ78_005984
Noggin; Belongs to the noggin family.
    
 0.587
ASZ78_007798
Noggin; Belongs to the noggin family.
    
 0.584
ASZ78_013925
Uncharacterized protein.
    
 0.557
ASZ78_012112
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.
    
 0.557
ASZ78_014554
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.
    
 0.557
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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