STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_002890Uncharacterized protein. (254 aa)    
Predicted Functional Partners:
ASZ78_002889
HECT domain-containing protein.
 
     0.918
ASZ78_002888
HECT domain-containing protein.
 
      0.900
ASZ78_002892
Uncharacterized protein.
 
      0.898
ASZ78_000209
Uncharacterized protein.
   
 
 0.791
ASZ78_013747
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.675
ASZ78_011985
Uncharacterized protein.
   
 0.659
ASZ78_015346
HECT domain-containing protein.
 
 
 
 0.642
ASZ78_011371
MPN domain-containing protein.
    
 
 0.548
ASZ78_011369
MitMem_reg domain-containing protein.
    
 
 0.548
ASZ78_010518
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
    
 
 0.546
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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