STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_004968Uncharacterized protein. (462 aa)    
Predicted Functional Partners:
ASZ78_004967
SAM domain-containing protein.
 
     0.930
ASZ78_009225
RING-type domain-containing protein.
    
 0.730
ASZ78_009180
RanBP2-type domain-containing protein.
    
 0.648
ASZ78_014563
RanBP2-type domain-containing protein.
    
 0.648
ASZ78_002153
RING-type domain-containing protein.
   
 0.635
ASZ78_008151
RAWUL domain-containing protein.
   
 0.630
ASZ78_006992
ANK_REP_REGION domain-containing protein.
    
 0.627
ASZ78_012671
WD_REPEATS_REGION domain-containing protein.
   
 0.584
ASZ78_002133
Uncharacterized protein.
    
 0.583
ASZ78_010458
RING-type domain-containing protein.
    
 0.583
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.