STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_009773Helicase ATP-binding domain-containing protein. (350 aa)    
Predicted Functional Partners:
ASZ78_002693
Uncharacterized protein.
   
 0.996
ASZ78_012731
Uncharacterized protein.
  
 0.992
ASZ78_014090
Uncharacterized protein.
   
 0.991
ASZ78_014087
RING-type domain-containing protein.
   
 0.991
ASZ78_003239
DNA_mis_repair domain-containing protein.
   
 0.990
ASZ78_005089
Uncharacterized protein.
   
 0.977
ASZ78_008411
Tower domain-containing protein.
   
 0.969
ASZ78_008412
Uncharacterized protein.
   
 0.969
ASZ78_002255
Uncharacterized protein.
  
 0.967
ASZ78_000726
Uncharacterized protein.
  
 0.966
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.