STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_008535Collectrin domain-containing protein. (226 aa)    
Predicted Functional Partners:
ASZ78_017101
SERPIN domain-containing protein; Belongs to the serpin family.
    
 0.887
ASZ78_002699
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
 
 0.819
ASZ78_011375
Uncharacterized protein; Belongs to the peptidase S9B family.
     
 0.816
ASZ78_003728
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
 
 0.803
ASZ78_003729
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
 
 0.802
ASZ78_010588
Uncharacterized protein.
     
 0.740
ASZ78_001386
Meprin A subunit.
   
 
 0.739
ASZ78_010537
Cystatin kininogen-type domain-containing protein.
    
 0.685
ASZ78_000384
Uncharacterized protein.
    
 0.685
ASZ78_008183
Uncharacterized protein.
    
 0.664
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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