ASZ78_013901 protein (Callipepla squamata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ASZ78_013901

Fork-head domain-containing protein. (397 aa)

Predicted Functional Partners:

ASZ78_006348

0.724

ASZ78_001380

0.662

ASZ78_004357

0.580

ASZ78_006949

0.580

ASZ78_000952

0.580

ASZ78_007911

0.571

ASZ78_001892

0.570

SIRT5

0.569

ASZ78_004333

0.567

ASZ78_004211

0.566

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000952	ASZ78_001892	A0A226MYG1	A0A226MDM0	Uncharacterized protein.	Deacetylase sirtuin-type domain-containing protein.	0.755
ASZ78_000952	ASZ78_004211	A0A226MYG1	A0A226MF11	Uncharacterized protein.	Mothers against decapentaplegic homolog.	0.804
ASZ78_000952	ASZ78_004357	A0A226MYG1	A0A226MGM4	Uncharacterized protein.	Uncharacterized protein.	0.997
ASZ78_000952	ASZ78_013901	A0A226MYG1	A0A226NGM1	Uncharacterized protein.	Fork-head domain-containing protein.	0.580
ASZ78_000952	SIRT5	A0A226MYG1	A0A226NKN3	Uncharacterized protein.	NAD-dependent protein deacylase sirtuin-5, mitochondrial; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.	0.516
ASZ78_001380	ASZ78_013901	A0A226MJD8	A0A226NGM1	Non-specific serine/threonine protein kinase.	Fork-head domain-containing protein.	0.662
ASZ78_001892	ASZ78_000952	A0A226MDM0	A0A226MYG1	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein.	0.755
ASZ78_001892	ASZ78_004357	A0A226MDM0	A0A226MGM4	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein.	0.753
ASZ78_001892	ASZ78_006949	A0A226MDM0	A0A226MSB9	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein.	0.516
ASZ78_001892	ASZ78_013901	A0A226MDM0	A0A226NGM1	Deacetylase sirtuin-type domain-containing protein.	Fork-head domain-containing protein.	0.570
ASZ78_001892	SIRT5	A0A226MDM0	A0A226NKN3	Deacetylase sirtuin-type domain-containing protein.	NAD-dependent protein deacylase sirtuin-5, mitochondrial; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.	0.850
ASZ78_004211	ASZ78_000952	A0A226MF11	A0A226MYG1	Mothers against decapentaplegic homolog.	Uncharacterized protein.	0.804
ASZ78_004211	ASZ78_004357	A0A226MF11	A0A226MGM4	Mothers against decapentaplegic homolog.	Uncharacterized protein.	0.878
ASZ78_004211	ASZ78_013901	A0A226MF11	A0A226NGM1	Mothers against decapentaplegic homolog.	Fork-head domain-containing protein.	0.566
ASZ78_004333	ASZ78_013901	A0A226MFZ9	A0A226NGM1	Uncharacterized protein.	Fork-head domain-containing protein.	0.567
ASZ78_004357	ASZ78_000952	A0A226MGM4	A0A226MYG1	Uncharacterized protein.	Uncharacterized protein.	0.997
ASZ78_004357	ASZ78_001892	A0A226MGM4	A0A226MDM0	Uncharacterized protein.	Deacetylase sirtuin-type domain-containing protein.	0.753
ASZ78_004357	ASZ78_004211	A0A226MGM4	A0A226MF11	Uncharacterized protein.	Mothers against decapentaplegic homolog.	0.878
ASZ78_004357	ASZ78_013901	A0A226MGM4	A0A226NGM1	Uncharacterized protein.	Fork-head domain-containing protein.	0.580
ASZ78_004357	SIRT5	A0A226MGM4	A0A226NKN3	Uncharacterized protein.	NAD-dependent protein deacylase sirtuin-5, mitochondrial; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.	0.516