STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_010346Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (796 aa)    
Predicted Functional Partners:
ASZ78_004179
Uncharacterized protein.
   
 0.999
ASZ78_002081
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 0.998
ASZ78_004448
Uncharacterized protein.
   
 0.991
ASZ78_016103
PX domain-containing protein.
   
 0.988
ASZ78_008763
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 0.988
ASZ78_014026
PX domain-containing protein.
   
 0.977
ASZ78_006611
PX domain-containing protein.
   
 0.976
ASZ78_006195
PX domain-containing protein.
   
 0.971
ASZ78_001079
Uncharacterized protein.
    
 0.921
ASZ78_008938
PX domain-containing protein.
    
 0.921
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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