STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV71937.1Phage lysin. (160 aa)    
Predicted Functional Partners:
SFV71943.1
Mu-like prophage FluMu protein gp29.
 
     0.776
SFV71944.1
Phage (Mu-like) virion morphogenesis protein.
 
     0.755
SFV71942.1
Phage terminase, large subunit.
 
     0.752
SFV72336.1
Mu-like prophage FluMu protein gp29.
 
     0.735
SFV72337.1
Phage (Mu-like) virion morphogenesis protein.
 
     0.735
SFV72319.1
DNA transposition protein.
  
     0.723
SFV71949.1
Virion morphogenesis protein.
 
    0.718
SFV72343.1
Virion morphogenesis protein.
 
    0.715
SFV71928.1
DNA transposition protein.
  
     0.708
SFV72335.1
Phage terminase, large subunit.
 
     0.707
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.