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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72009.1ABC-type transport system involved in resistance to organic solvents, permease component. (375 aa)    
Predicted Functional Partners:
SFV72008.1
ABC transporter, ATP-binding protein.
 
 0.997
SFV73068.1
Mce related protein.
 
 0.988
SFV73067.1
ABC transporter, ATP-binding protein.
 
 0.985
SFV73066.1
FIG00757739: hypothetical protein.
  
  
 
0.921
ttg2D
ABC-type transport system involved in resistance to organic solvents, auxiliary component.
 
 
 0.879
SFV72007.1
Paraquat-inducible protein B.
 
     0.855
SFV72006.1
Protein of unknown function DUF330.
 
     0.790
SFV72307.1
Anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV.
   
   0.709
yaeT
Outer membrane protein assembly factor YaeT precursor.
 
     0.652
polA
DNA polymerase I.
     
 0.560
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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